BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G09SP1|AL430602
(923 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig921 1830 0.0
>3x_Contig921
Length = 3599
Score = 1830 bits (923), Expect = 0.0
Identities = 923/923 (100%)
Strand = Plus / Minus
Query: 1 gatctctgatttgtattccttgagctcttcttcaacttgtgtaggttccatcgccttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 gatctctgatttgtattccttgagctcttcttcaacttgtgtaggttccatcgccttttc 2878
Query: 61 aatcttttcaaagtgacacaattatgcaccttattaaataaccttctaaatcgattatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 aatcttttcaaagtgacacaattatgcaccttattaaataaccttctaaatcgattatat 2818
Query: 121 tttgattggcgaggttctggtatcgatctcatttaatgtagttatattgccttggaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817 tttgattggcgaggttctggtatcgatctcatttaatgtagttatattgccttggaatag 2758
Query: 181 tgagttttcagcaaaactgtagtgagcttataatcacaatttgtaatttgcttaagagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2757 tgagttttcagcaaaactgtagtgagcttataatcacaatttgtaatttgcttaagagtt 2698
Query: 241 cattggctagtataatgttctgaatgttaggccctttttttattgacgtacactttgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2697 cattggctagtataatgttctgaatgttaggccctttttttattgacgtacactttgtga 2638
Query: 301 caaacaggatatatgataaaaaatagtcacagagtcaagtcaccttgaatccaactgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2637 caaacaggatatatgataaaaaatagtcacagagtcaagtcaccttgaatccaactgata 2578
Query: 361 taaatagatggatatacttagtttaatttatttgtgtgagatgcaactatatattatact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2577 taaatagatggatatacttagtttaatttatttgtgtgagatgcaactatatattatact 2518
Query: 421 gaatgaattaagatgttcttttttaaagaagcgcacatgattagctcaatacttttagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2517 gaatgaattaagatgttcttttttaaagaagcgcacatgattagctcaatacttttagat 2458
Query: 481 gaatgcctctctgggtagattgtttgcactgtttctaaatccttggatagcattatcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2457 gaatgcctctctgggtagattgtttgcactgtttctaaatccttggatagcattatcata 2398
Query: 541 gttccaaagactttgctcggcaagcatataagtgtactcagcgttaagctttgtttcaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 gttccaaagactttgctcggcaagcatataagtgtactcagcgttaagctttgtttcaag 2338
Query: 601 gtgtaacttctgaagtagttctaattgtacaggtgacaattttgcttgcacttccggtga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 gtgtaacttctgaagtagttctaattgtacaggtgacaattttgcttgcacttccggtga 2278
Query: 661 gaattgcaaaggtgtcgatccaagaactcccgggatttggccaggaatggatgatgtatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 gaattgcaaaggtgtcgatccaagaactcccgggatttggccaggaatggatgatgtatt 2218
Query: 721 tggcggagtttgtgagaggggcacgttcatttgtggctgatgttgcacagattgagcttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 tggcggagtttgtgagaggggcacgttcatttgtggctgatgttgcacagattgagcttg 2158
Query: 781 gagatgtggtggagaaggtggtttagaccaagcgctatcacagaatggccttatcgtcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2157 gagatgtggtggagaaggtggtttagaccaagcgctatcacagaatggccttatcgtcaa 2098
Query: 841 cgaatcagatgcaatgatgacactaccatttggacttggaactaagaccattgttctatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 cgaatcagatgcaatgatgacactaccatttggacttggaactaagaccattgttctatc 2038
Query: 901 gaaggatttctgtgaaagtttga 923
|||||||||||||||||||||||
Sbjct: 2037 gaaggatttctgtgaaagtttga 2015
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6787
Number of Sequences: 1807
Number of extensions: 6787
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)